Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative manganese transporter | D0N37_RS10320 | Not Available | Positive | 2183135 - 2184301 | 41476.4 |
| hypothetical protein | D0N37_RS10330 | Not Available | Negative | 2184607 - 2185086 | 18410.1 |
| integrase core domain-containing protein | D0N37_RS10335 | Not Available | Positive | 2185108 - 2185836 | 28126.8 |
| integrase core domain-containing protein | D0N37_RS10340 | Not Available | Positive | 2186055 - 2186225 | 5701.89 |
| hypothetical protein | D0N37_RS10345 | Not Available | Negative | 2186532 - 2187155 | 23693.7 |
| transposase | D0N37_RS10350 | Not Available | Positive | 2187375 - 2188346 | 37615.4 |
| duf3800 domain-containing protein | D0N37_RS10355 | Not Available | Negative | 2188568 - 2189341 | 29406.2 |
| isas1 family transposase | D0N37_RS10360 | Not Available | Positive | 2189439 - 2190536 | 41361.8 |
| duf6979 family protein | D0N37_RS10365 | Not Available | Negative | 2190668 - 2191054 | 14092.0 |
| transposase | D0N37_RS10370 | Not Available | Negative | 2191253 - 2192791 | 58400.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
