Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0N37_RS24755 | Not Available | Negative | 2172296 - 2172478 | 6527.0 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | D0N37_RS10275 | Not Available | Positive | 2172920 - 2173627 | 26804.1 |
| proline--trna ligase | D0N37_RS10280 | Not Available | Positive | 2173759 - 2175486 | 63943.7 |
| udp-2,3-diacylglucosamine diphosphatase | D0N37_RS10285 | Not Available | Positive | 2175617 - 2176417 | 30745.7 |
| hypothetical protein | D0N37_RS10290 | Not Available | Negative | 2176440 - 2176733 | 11680.6 |
| hypothetical protein | D0N37_RS10295 | Not Available | Negative | 2176889 - 2178037 | 43209.6 |
| abc transporter permease | D0N37_RS10300 | Not Available | Negative | 2178193 - 2179401 | 44214.9 |
| atp-binding cassette domain-containing protein | D0N37_RS10305 | Not Available | Negative | 2179394 - 2180179 | 28619.8 |
| duf3025 domain-containing protein | D0N37_RS10310 | Not Available | Negative | 2180181 - 2180981 | 31534.2 |
| integrase core domain-containing protein | D0N37_RS10315 | Not Available | Positive | 2181440 - 2183064 | 57652.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
