Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | D0N37_RS10170 | Not Available | Negative | 2152950 - 2154167 | 44713.8 |
| integrase core domain-containing protein | D0N37_RS10175 | Not Available | Negative | 2154519 - 2155552 | 38318.9 |
| phosphoglucomutase (alpha-d-glucose-1,6-bisphosphate-dependent) | D0N37_RS10180 | Not Available | Negative | 2155634 - 2157271 | 59077.8 |
| replication initiation negative regulator seqa | D0N37_RS10185 | Not Available | Negative | 2157285 - 2157833 | 20651.9 |
| alpha/beta fold hydrolase | D0N37_RS10190 | Not Available | Positive | 2157970 - 2158737 | 28802.6 |
| duf2788 domain-containing protein | D0N37_RS10195 | Not Available | Positive | 2158825 - 2159046 | 8108.17 |
| lexa regulated protein | D0N37_RS10200 | Not Available | Positive | 2159046 - 2159324 | 10665.9 |
| flavodoxin flda | D0N37_RS10205 | Not Available | Positive | 2159339 - 2159866 | 19757.0 |
| ferric iron uptake transcriptional regulator | D0N37_RS10210 | Not Available | Positive | 2159970 - 2160416 | 16696.7 |
| voc family protein | D0N37_RS10215 | Not Available | Negative | 2160466 - 2160630 | 5975.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
