Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4382 domain-containing protein | D0N37_RS10120 | Not Available | Negative | 2139822 - 2140781 | 34369.8 |
| methyl-accepting chemotaxis protein | D0N37_RS10125 | Not Available | Positive | 2140948 - 2142816 | 67252.8 |
| pilz domain-containing protein | D0N37_RS10130 | Not Available | Positive | 2142883 - 2143449 | 21334.3 |
| agmatine/peptidylarginine deiminase | D0N37_RS10135 | Not Available | Positive | 2143564 - 2144601 | 38845.1 |
| carbon-nitrogen hydrolase | D0N37_RS10140 | Not Available | Positive | 2144607 - 2145497 | 33053.1 |
| transcription-repair coupling factor | D0N37_RS10145 | Not Available | Positive | 2145514 - 2148987 | 130051.0 |
| csiv family protein | D0N37_RS10150 | Not Available | Positive | 2148984 - 2149808 | 31507.1 |
| duf3862 domain-containing protein | D0N37_RS10155 | Not Available | Positive | 2149821 - 2150069 | 9040.04 |
| integrase core domain-containing protein | D0N37_RS10160 | Not Available | Negative | 2150393 - 2151963 | 56647.2 |
| alpha-ketoacid dehydrogenase subunit beta | D0N37_RS10165 | Not Available | Negative | 2151973 - 2152950 | 35596.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
