Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | D0N37_RS10015 | Not Available | Negative | 2120267 - 2121447 | 45298.0 |
| hypothetical protein | D0N37_RS10020 | Not Available | Negative | 2121491 - 2121712 | 8262.73 |
| integrase core domain-containing protein | D0N37_RS10025 | Not Available | Positive | 2121864 - 2122173 | 11571.0 |
| hypothetical protein | D0N37_RS10030 | Not Available | Positive | 2122341 - 2123396 | 39227.4 |
| cher family methyltransferase | D0N37_RS10040 | Not Available | Negative | 2124117 - 2124917 | 30940.2 |
| sensor histidine kinase | D0N37_RS10045 | Not Available | Negative | 2125533 - 2126831 | 48513.5 |
| chemotaxis protein chec | D0N37_RS10050 | Not Available | Negative | 2126834 - 2127415 | 21386.9 |
| response regulator | D0N37_RS10055 | Not Available | Negative | 2127412 - 2127777 | 13498.6 |
| acyl-coa thioesterase | D0N37_RS10060 | Not Available | Negative | 2128059 - 2128493 | 16071.2 |
| m23 family metallopeptidase | D0N37_RS10065 | Not Available | Negative | 2128490 - 2129314 | 30266.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
