Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0N37_RS09700 | Not Available | Negative | 2056387 - 2057061 | 26408.6 |
| hypothetical protein | D0N37_RS09825 | Not Available | Positive | 2076765 - 2078147 | 49269.3 |
| hypothetical protein | D0N37_RS09830 | Not Available | Positive | 2078156 - 2081101 | 107294.0 |
| duf4376 domain-containing protein | D0N37_RS09835 | Not Available | Positive | 2081112 - 2081780 | 25442.1 |
| hypothetical protein | D0N37_RS09840 | Not Available | Positive | 2081798 - 2082166 | 14054.7 |
| dead/deah box helicase | D0N37_RS09845 | Not Available | Negative | 2082560 - 2084659 | 80399.6 |
| duf1837 domain-containing protein | D0N37_RS09850 | Not Available | Negative | 2084652 - 2085581 | 35582.1 |
| tnsa endonuclease n-terminal domain-containing protein | D0N37_RS09855 | Not Available | Positive | 2086284 - 2086895 | 23407.9 |
| dde-type integrase/transposase/recombinase | D0N37_RS09860 | Not Available | Positive | 2086898 - 2088634 | 66559.4 |
| tnib family ntp-binding protein | D0N37_RS09865 | Not Available | Positive | 2088922 - 2089890 | 37114.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
