Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminasetgpa domain-containing protein | D0N37_RS09435 | Not Available | Negative | 2020447 - 2022390 | 73658.0 |
| duf58 domain-containing protein | D0N37_RS09440 | Not Available | Negative | 2022380 - 2023309 | 35306.5 |
| aaa family atpase | D0N37_RS09445 | Not Available | Negative | 2023324 - 2024229 | 33260.0 |
| response regulator | D0N37_RS09450 | Not Available | Negative | 2024226 - 2024609 | 14435.3 |
| hypothetical protein | D0N37_RS09670 | Not Available | Negative | 2051653 - 2051997 | 12873.6 |
| helix-turn-helix domain-containing protein | D0N37_RS09675 | Not Available | Negative | 2052101 - 2052430 | 12175.6 |
| helix-turn-helix domain-containing protein | D0N37_RS09680 | Not Available | Positive | 2052597 - 2053094 | 18507.4 |
| hypothetical protein | D0N37_RS09685 | Not Available | Positive | 2053103 - 2053636 | 19704.7 |
| hypothetical protein | D0N37_RS09690 | Not Available | Positive | 2053677 - 2054567 | 33550.0 |
| atp-binding protein | D0N37_RS09695 | Not Available | Positive | 2054594 - 2056342 | 64976.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
