Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent succinate-semialdehyde dehydrogenase | D0N37_RS09335 | Not Available | Positive | 1995780 - 1997162 | 50478.0 |
| l-threonylcarbamoyladenylate synthase | D0N37_RS09340 | Not Available | Positive | 1997270 - 1998280 | 35805.9 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS09345 | Not Available | Positive | 1998479 - 1999516 | 37808.8 |
| efflux rnd transporter permease subunit | D0N37_RS09350 | Not Available | Positive | 1999562 - 2002612 | 109968.0 |
| hypothetical protein | D0N37_RS09355 | Not Available | Positive | 2002847 - 2003218 | 13770.3 |
| Trna-ser | Not Available | Not Available | Positive | 2003309 - 2003399 | Not Available |
| hypothetical protein | D0N37_RS09365 | Not Available | Positive | 2003453 - 2003836 | 14114.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | D0N37_RS09370 | Not Available | Positive | 2003956 - 2004570 | 22441.3 |
| gfo/idh/moca family oxidoreductase | D0N37_RS09375 | Not Available | Negative | 2004760 - 2005722 | 35110.1 |
| tomm precursor leader peptide-binding protein | D0N37_RS09380 | Not Available | Negative | 2005732 - 2008125 | 87236.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
