Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yceh family protein | D0N37_RS00325 | Not Available | Negative | 61659 - 62288 | 23518.9 |
| atp-binding protein | D0N37_RS00330 | Not Available | Negative | 62384 - 65740 | 124886.0 |
| penicillin acylase family protein | D0N37_RS00335 | Not Available | Positive | 65936 - 68230 | 84129.3 |
| ggdef domain-containing protein | D0N37_RS25330 | Not Available | Negative | 68259 - 68585 | 11912.2 |
| ggdef domain-containing protein | D0N37_RS25335 | Not Available | Negative | 68591 - 69328 | 28344.5 |
| bifunctional gnat family n-acetyltransferase/carbon-nitrogen hydrolase family protein | D0N37_RS00345 | Not Available | Positive | 69486 - 71012 | 58127.1 |
| dmt family transporter | D0N37_RS00350 | Not Available | Positive | 71014 - 71328 | 11333.4 |
| dmt family transporter | D0N37_RS00355 | Not Available | Negative | 71315 - 72184 | 31421.4 |
| integrase core domain-containing protein | D0N37_RS00360 | Not Available | Positive | 72490 - 72875 | 13834.5 |
| pseudouridine synthase | D0N37_RS00365 | Not Available | Negative | 72900 - 73592 | 26038.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
