Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | D0N37_RS09280 | Not Available | Positive | 1977753 - 1978933 | 45298.0 |
| duf5666 domain-containing protein | D0N37_RS09285 | Not Available | Positive | 1979284 - 1981791 | 90601.3 |
| bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | D0N37_RS09290 | Not Available | Positive | 1982111 - 1984150 | 74299.3 |
| duf6359 domain-containing protein | D0N37_RS09295 | Not Available | Positive | 1984220 - 1986388 | 77545.2 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS09300 | Not Available | Positive | 1986666 - 1987706 | 37457.5 |
| efflux rnd transporter permease subunit | D0N37_RS09305 | Not Available | Positive | 1987716 - 1990832 | 112982.0 |
| patatin family protein | D0N37_RS09310 | Not Available | Positive | 1990993 - 1991874 | 32961.4 |
| s1 rna-binding domain-containing protein | D0N37_RS09320 | Not Available | Negative | 1992116 - 1992946 | 30669.1 |
| dead/deah box helicase | D0N37_RS09325 | Not Available | Negative | 1992949 - 1994280 | 49644.9 |
| rhodanese-related sulfurtransferase | D0N37_RS09330 | Not Available | Positive | 1994489 - 1995472 | 37778.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
