Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class 1a ribonucleoside-diphosphate reductase subunit alpha | D0N37_RS09070 | Not Available | Negative | 1928558 - 1930843 | 85794.9 |
| had family hydrolase | D0N37_RS09075 | Not Available | Negative | 1931199 - 1931846 | 23145.1 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | D0N37_RS09080 | Not Available | Negative | 1931843 - 1932553 | 26364.7 |
| dna gyrase subunit a | D0N37_RS09085 | Not Available | Positive | 1932819 - 1935491 | 98954.6 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | D0N37_RS09090 | Not Available | Positive | 1935702 - 1936784 | 40204.1 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | D0N37_RS09095 | Not Available | Positive | 1936784 - 1938064 | 45703.1 |
| (d)cmp kinase | D0N37_RS09100 | Not Available | Positive | 1938317 - 1939033 | 26010.3 |
| 30s ribosomal protein s1 | D0N37_RS09105 | Not Available | Positive | 1939132 - 1940799 | 61110.5 |
| integration host factor subunit beta | D0N37_RS09110 | Not Available | Positive | 1940861 - 1941151 | 10842.8 |
| lipopolysaccharide assembly protein lapa domain-containing protein | D0N37_RS09115 | Not Available | Positive | 1941169 - 1941432 | 9249.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
