Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS08910 | Not Available | Negative | 1892908 - 1894080 | 42608.7 |
| tetr/acrr family transcriptional regulator | D0N37_RS08915 | Not Available | Positive | 1894504 - 1895106 | 22746.2 |
| abc transporter atp-binding protein | D0N37_RS08920 | Not Available | Negative | 1895090 - 1896934 | 68636.6 |
| hypothetical protein | D0N37_RS08925 | Not Available | Negative | 1897024 - 1898085 | 39983.6 |
| duf3010 family protein | D0N37_RS08930 | Not Available | Negative | 1898388 - 1898834 | 16916.3 |
| endonuclease/exonuclease/phosphatase family protein | D0N37_RS08935 | Not Available | Negative | 1898869 - 1899861 | 37529.6 |
| threonine--trna ligase | D0N37_RS08940 | Not Available | Positive | 1900091 - 1902001 | 73169.5 |
| translation initiation factor if-3 | D0N37_RS08945 | Not Available | Positive | 1902058 - 1902621 | 21260.9 |
| 50s ribosomal protein l35 | D0N37_RS08950 | Not Available | Positive | 1902803 - 1903003 | 7657.66 |
| 50s ribosomal protein l20 | D0N37_RS08955 | Not Available | Positive | 1903019 - 1903378 | 13432.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
