Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase, hydrophobic membrane anchor protein | D0N37_RS08760 | Not Available | Positive | 1852712 - 1853059 | 12730.0 |
| integrase core domain-containing protein | D0N37_RS08765 | Not Available | Positive | 1853060 - 1854831 | 63947.3 |
| succinate dehydrogenase iron-sulfur subunit | D0N37_RS08770 | Not Available | Positive | 1854842 - 1855561 | 26630.2 |
| 2-oxoglutarate dehydrogenase e1 component | D0N37_RS08775 | Not Available | Positive | 1855646 - 1858459 | 105289.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | D0N37_RS08780 | Not Available | Positive | 1858470 - 1859963 | 53247.7 |
| adp-forming succinate--coa ligase subunit beta | D0N37_RS08785 | Not Available | Positive | 1860137 - 1861303 | 41314.5 |
| succinate--coa ligase subunit alpha | D0N37_RS08790 | Not Available | Positive | 1861303 - 1862175 | 29852.1 |
| crp/fnr family transcriptional regulator | D0N37_RS08795 | Not Available | Positive | 1862245 - 1862829 | 22306.2 |
| antibiotic biosynthesis monooxygenase family protein | D0N37_RS08800 | Not Available | Negative | 1862969 - 1863289 | 12274.2 |
| m24 family metallopeptidase | D0N37_RS08805 | Not Available | Negative | 1863399 - 1864610 | 44306.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
