Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | D0N37_RS08460 | Not Available | Positive | 1791163 - 1793844 | 100775.0 |
| hypothetical protein | D0N37_RS08465 | Not Available | Negative | 1793909 - 1794745 | 32026.7 |
| hypothetical protein | D0N37_RS08470 | Not Available | Positive | 1794880 - 1795173 | 10622.0 |
| nad(p)h-quinone oxidoreductase | D0N37_RS08475 | Not Available | Positive | 1795250 - 1796242 | 35942.3 |
| gnat family n-acetyltransferase | D0N37_RS08480 | Not Available | Positive | 1796417 - 1796728 | 11446.0 |
| Trna-val | Not Available | Not Available | Positive | 1797101 - 1797177 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1797296 - 1797372 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1797385 - 1797461 | Not Available |
| duf3080 family protein | D0N37_RS08505 | Not Available | Negative | 1797586 - 1798581 | 37481.5 |
| mate family efflux transporter | D0N37_RS08510 | Not Available | Negative | 1798556 - 1799914 | 48518.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
