Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | D0N37_RS08410 | Not Available | Negative | 1777520 - 1778958 | 51463.3 |
| sigma-54 interaction domain-containing protein | D0N37_RS08415 | Not Available | Positive | 1779113 - 1780540 | 53473.1 |
| cytochrome c oxidase accessory protein ccog | D0N37_RS08420 | Not Available | Positive | 1780682 - 1782064 | 53064.8 |
| cytochrome b | D0N37_RS08425 | Not Available | Positive | 1782218 - 1782793 | 21542.7 |
| ycei family protein | D0N37_RS08430 | Not Available | Positive | 1782808 - 1783368 | 20406.9 |
| tigr02285 family protein | D0N37_RS08435 | Not Available | Negative | 1783464 - 1784294 | 31237.8 |
| hypothetical protein | D0N37_RS08440 | Not Available | Positive | 1784582 - 1785169 | 21947.9 |
| acetoacetate decarboxylase | D0N37_RS08445 | Not Available | Positive | 1785239 - 1786216 | 37550.9 |
| nad(p)-binding protein | D0N37_RS08450 | Not Available | Positive | 1786329 - 1788569 | 85473.7 |
| tonb-dependent receptor | D0N37_RS08455 | Not Available | Positive | 1788818 - 1791058 | 82901.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
