Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mrp/nbp35 family atp-binding protein | D0N37_RS08360 | Not Available | Positive | 1764526 - 1765530 | 36092.1 |
| dctp deaminase | D0N37_RS08365 | Not Available | Positive | 1765631 - 1766215 | 21563.8 |
| eal domain-containing protein | D0N37_RS08370 | Not Available | Positive | 1766675 - 1769140 | 91907.7 |
| clca_x family protein | D0N37_RS08375 | Not Available | Negative | 1769100 - 1769888 | 29647.2 |
| pp_01603 | D0N37_RS08380 | Not Available | Negative | 1769898 - 1770488 | Not Available |
| hpt domain-containing protein | D0N37_RS08385 | Not Available | Positive | 1770608 - 1770952 | 12534.8 |
| pyridoxal phosphate-dependent aminotransferase | D0N37_RS08390 | Not Available | Positive | 1771142 - 1772356 | 45561.1 |
| efflux rnd transporter permease subunit | D0N37_RS08395 | Not Available | Negative | 1772422 - 1775592 | 116875.0 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS08400 | Not Available | Negative | 1775598 - 1776773 | 42634.2 |
| ykgj family cysteine cluster protein | D0N37_RS08405 | Not Available | Positive | 1777010 - 1777258 | 8904.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
