Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | D0N37_RS08315 | Not Available | Positive | 1754554 - 1755858 | 48421.3 |
| tetr/acrr family transcriptional regulator | D0N37_RS08320 | Not Available | Positive | 1756322 - 1756969 | 24419.0 |
| hlyd family secretion protein | D0N37_RS08325 | Not Available | Positive | 1756966 - 1757916 | 35090.4 |
| abc transporter atp-binding protein | D0N37_RS08330 | Not Available | Positive | 1757909 - 1758841 | 34136.9 |
| abc transporter permease | D0N37_RS08335 | Not Available | Positive | 1758825 - 1759967 | 42376.0 |
| lyse family translocator | D0N37_RS08340 | Not Available | Positive | 1760030 - 1760656 | 22131.8 |
| integrase core domain-containing protein | D0N37_RS25395 | Not Available | Positive | 1760796 - 1761119 | 12345.9 |
| helix-turn-helix transcriptional regulator | D0N37_RS25400 | Not Available | Positive | 1761132 - 1761506 | 14266.9 |
| lyse family translocator | D0N37_RS08350 | Not Available | Positive | 1761599 - 1762222 | 22820.4 |
| methionine--trna ligase | D0N37_RS08355 | Not Available | Negative | 1762287 - 1764323 | 76077.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
