Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonylcarbamoyladenylate synthase | D0N37_RS24690 | Not Available | Positive | 1718208 - 1718828 | 23386.3 |
| integrase core domain-containing protein | D0N37_RS08125 | Not Available | Positive | 1718840 - 1719633 | 29585.3 |
| smc-scp complex subunit scpb | D0N37_RS08130 | Not Available | Positive | 1719687 - 1720274 | 22222.8 |
| 23s rrna pseudouridine(2605) synthase rlub | D0N37_RS08135 | Not Available | Positive | 1720271 - 1721131 | 33355.6 |
| gfa family protein | D0N37_RS08140 | Not Available | Positive | 1721192 - 1721596 | 14531.4 |
| ycik family oxidoreductase | D0N37_RS08145 | Not Available | Negative | 1721644 - 1722387 | 26699.2 |
| vola/pla-1 family phospholipase | D0N37_RS08150 | Not Available | Positive | 1722584 - 1725013 | 83616.4 |
| protease sohb | D0N37_RS08155 | Not Available | Positive | 1725117 - 1726130 | 37170.9 |
| hypothetical protein | D0N37_RS08160 | Not Available | Positive | 1726244 - 1726552 | 11584.3 |
| integrase core domain-containing protein | D0N37_RS08165 | Not Available | Negative | 1726681 - 1727513 | 31709.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
