Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane glutamic endopeptidase | D0N37_RS08075 | Not Available | Negative | 1708667 - 1709308 | 24687.6 |
| inner membrane-spanning protein ycib | D0N37_RS08080 | Not Available | Negative | 1709399 - 1709968 | 21832.3 |
| hu family dna-binding protein | D0N37_RS08085 | Not Available | Positive | 1710091 - 1710363 | 9808.02 |
| tryptophan synthase subunit alpha | D0N37_RS08090 | Not Available | Negative | 1710406 - 1711212 | 29155.3 |
| tryptophan synthase subunit beta | D0N37_RS08095 | Not Available | Negative | 1711209 - 1712393 | 42855.4 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | D0N37_RS08100 | Not Available | Negative | 1712401 - 1713765 | 49800.6 |
| anthranilate phosphoribosyltransferase | D0N37_RS08105 | Not Available | Negative | 1713758 - 1714762 | 34996.0 |
| aminodeoxychorismate/anthranilate synthase component ii | D0N37_RS08110 | Not Available | Negative | 1714772 - 1715353 | 20874.3 |
| anthranilate synthase component 1 | D0N37_RS08115 | Not Available | Negative | 1715346 - 1716923 | 57959.7 |
| integrase core domain-containing protein | D0N37_RS25390 | Not Available | Positive | 1717359 - 1718189 | 31306.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
