Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lpp20 family lipoprotein | D0N37_RS08025 | Not Available | Positive | 1699712 - 1700290 | 21058.0 |
| murein transglycosylase domain-containing protein | D0N37_RS08030 | Not Available | Positive | 1700332 - 1701678 | 50775.9 |
| integrase core domain-containing protein | D0N37_RS08035 | Not Available | Negative | 1701673 - 1702568 | 33295.4 |
| ai-2e family transporter | D0N37_RS08040 | Not Available | Positive | 1702684 - 1703721 | 37291.3 |
| hypothetical protein | D0N37_RS08045 | Not Available | Negative | 1703845 - 1704279 | 16763.4 |
| atp-binding protein | D0N37_RS08050 | Not Available | Negative | 1704263 - 1705606 | 49825.1 |
| response regulator transcription factor | D0N37_RS08055 | Not Available | Negative | 1705600 - 1706274 | 25783.9 |
| integrase core domain-containing protein | D0N37_RS25620 | Not Available | Negative | 1706277 - 1706533 | 9721.15 |
| ycii family protein | D0N37_RS08065 | Not Available | Negative | 1706643 - 1706942 | 10913.9 |
| sodium-dependent transporter | D0N37_RS08070 | Not Available | Positive | 1707164 - 1708588 | 51503.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
