Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | D0N37_RS07975 | Not Available | Negative | 1689311 - 1691058 | 65410.3 |
| duf4094 domain-containing protein | D0N37_RS07980 | Not Available | Negative | 1691222 - 1691698 | 18365.4 |
| duf3413 domain-containing protein | D0N37_RS07985 | Not Available | Negative | 1691764 - 1693284 | 55934.3 |
| duf1414 domain-containing protein | D0N37_RS07990 | Not Available | Negative | 1693289 - 1693501 | 7765.35 |
| nucleoid-associated protein yejk | D0N37_RS07995 | Not Available | Positive | 1693567 - 1694580 | 38512.9 |
| porin | D0N37_RS08000 | Not Available | Positive | 1694734 - 1695810 | 40426.9 |
| phosphate abc transporter substrate-binding protein | D0N37_RS08005 | Not Available | Positive | 1695821 - 1696225 | 14205.0 |
| lpp20 family lipoprotein | D0N37_RS08010 | Not Available | Negative | 1696264 - 1697304 | 38631.9 |
| penicillin-binding protein activator lpob | D0N37_RS08015 | Not Available | Negative | 1697252 - 1697869 | 23244.6 |
| hypothetical protein | D0N37_RS08020 | Not Available | Negative | 1697874 - 1699535 | 62442.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
