Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | D0N37_RS07925 | Not Available | Positive | 1680715 - 1681760 | 37581.5 |
| integrase core domain-containing protein | D0N37_RS07930 | Not Available | Positive | 1681814 - 1682739 | 33275.1 |
| 3-oxoacyl-acp reductase fabg | D0N37_RS07935 | Not Available | Positive | 1682753 - 1683499 | 25797.9 |
| acyl carrier protein | D0N37_RS07940 | Not Available | Positive | 1683716 - 1683952 | 8685.04 |
| beta-ketoacyl-acp synthase ii | D0N37_RS07945 | Not Available | Positive | 1684039 - 1685277 | 43033.2 |
| aminodeoxychorismate lyase | D0N37_RS07950 | Not Available | Positive | 1685375 - 1686148 | 28797.0 |
| endolytic transglycosylase mltg | D0N37_RS07955 | Not Available | Positive | 1686154 - 1687125 | 36659.2 |
| marc family protein | D0N37_RS07960 | Not Available | Negative | 1687172 - 1687780 | 21507.2 |
| hypothetical protein | D0N37_RS07965 | Not Available | Negative | 1687895 - 1688275 | 13986.8 |
| lysr family transcriptional regulator | D0N37_RS07970 | Not Available | Negative | 1688383 - 1689321 | 35287.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
