Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | D0N37_RS07880 | Not Available | Negative | 1669796 - 1670917 | 39864.1 |
| lysr substrate-binding domain-containing protein | D0N37_RS07885 | Not Available | Positive | 1671013 - 1671888 | 32796.5 |
| sulp family inorganic anion transporter | D0N37_RS07890 | Not Available | Negative | 1671875 - 1673533 | 58720.3 |
| ribonuclease e | D0N37_RS07895 | Not Available | Negative | 1673682 - 1677083 | 125834.0 |
| hypothetical protein | D0N37_RS24400 | Not Available | Negative | 1677284 - 1677421 | 4991.88 |
| 23s rrna pseudouridine(955/2504/2580) synthase rluc | D0N37_RS07900 | Not Available | Positive | 1677694 - 1678644 | 35944.7 |
| had family hydrolase | D0N37_RS07905 | Not Available | Positive | 1678646 - 1679290 | 23079.9 |
| maf family protein | D0N37_RS07910 | Not Available | Negative | 1679282 - 1679878 | 21561.9 |
| 23s rrna accumulation protein yced | D0N37_RS07915 | Not Available | Positive | 1679998 - 1680522 | 19591.2 |
| 50s ribosomal protein l32 | D0N37_RS07920 | Not Available | Positive | 1680533 - 1680703 | 6246.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
