Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fixh family protein | D0N37_RS07825 | Not Available | Negative | 1660399 - 1660890 | 18667.6 |
| cytochrome-c oxidase, cbb3-type subunit iii | D0N37_RS07830 | Not Available | Negative | 1661009 - 1661974 | 35346.9 |
| cbb3-type cytochrome oxidase subunit 3 | D0N37_RS07835 | Not Available | Negative | 1661971 - 1662156 | 7166.55 |
| cytochrome-c oxidase, cbb3-type subunit ii | D0N37_RS07840 | Not Available | Negative | 1662162 - 1662836 | 25339.8 |
| cytochrome-c oxidase, cbb3-type subunit i | D0N37_RS07845 | Not Available | Negative | 1662849 - 1664282 | 53232.6 |
| hypothetical protein | D0N37_RS07850 | Not Available | Positive | 1664572 - 1665024 | 16440.1 |
| transcription elongation factor greab | D0N37_RS07855 | Not Available | Positive | 1665021 - 1665497 | 17673.8 |
| glxa family transcriptional regulator | D0N37_RS07860 | Not Available | Negative | 1665523 - 1666515 | 36865.3 |
| integrase core domain-containing protein | D0N37_RS07865 | Not Available | Positive | 1666633 - 1668530 | 68878.2 |
| s-formylglutathione hydrolase | D0N37_RS07875 | Not Available | Negative | 1668897 - 1669739 | 31431.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
