Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | D0N37_RS07775 | Not Available | Positive | 1648240 - 1648974 | 26350.1 |
| abc transporter permease | D0N37_RS07780 | Not Available | Positive | 1648971 - 1650107 | 41331.6 |
| trna 2-thiocytidine(32) synthetase ttca | D0N37_RS07785 | Not Available | Positive | 1650271 - 1651164 | 33812.6 |
| tonb-dependent siderophore receptor | D0N37_RS07790 | Not Available | Positive | 1651706 - 1653859 | 79452.7 |
| pepsy-associated tm helix domain-containing protein | D0N37_RS07795 | Not Available | Positive | 1653933 - 1655129 | 45482.4 |
| universal stress protein uspe | D0N37_RS07800 | Not Available | Negative | 1655184 - 1656107 | 34319.0 |
| fnr family transcription factor | D0N37_RS07805 | Not Available | Negative | 1656227 - 1656961 | 27348.9 |
| sulfite exporter taue/safe family protein | D0N37_RS07810 | Not Available | Negative | 1657147 - 1657818 | 24059.4 |
| cbb3-type cytochrome oxidase assembly protein ccos | D0N37_RS07815 | Not Available | Negative | 1657820 - 1658020 | 7385.89 |
| heavy metal translocating p-type atpase | D0N37_RS07820 | Not Available | Negative | 1658017 - 1660392 | 86845.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
