Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0N37_RS07520 | Not Available | Negative | 1594230 - 1594376 | 5321.44 |
| hypothetical protein | D0N37_RS07530 | Not Available | Positive | 1594962 - 1595228 | 9987.63 |
| ybak/ebsc family protein | D0N37_RS07535 | Not Available | Positive | 1595459 - 1595941 | 17095.2 |
| class ii glutamine amidotransferase | D0N37_RS07540 | Not Available | Positive | 1596524 - 1597288 | 28768.4 |
| duf3108 domain-containing protein | D0N37_RS07545 | Not Available | Negative | 1597353 - 1598048 | 26774.7 |
| phosphoribosylglycinamide formyltransferase | D0N37_RS07550 | Not Available | Negative | 1598062 - 1598712 | 23628.3 |
| phosphoribosylformylglycinamidine cyclo-ligase | D0N37_RS07555 | Not Available | Negative | 1598712 - 1599764 | 37351.7 |
| ydch family protein | D0N37_RS07560 | Not Available | Positive | 1600145 - 1600387 | 9640.41 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | D0N37_RS07565 | Not Available | Positive | 1600640 - 1602142 | 56559.3 |
| lysr substrate-binding domain-containing protein | D0N37_RS07570 | Not Available | Negative | 1602204 - 1603175 | 36457.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
