Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triose-phosphate isomerase | D0N37_RS07470 | Not Available | Positive | 1580839 - 1581579 | 26257.0 |
| preprotein translocase subunit secg | D0N37_RS07475 | Not Available | Positive | 1581584 - 1581931 | 11843.3 |
| Trna-leu | Not Available | Not Available | Positive | 1581955 - 1582038 | Not Available |
| tonb-dependent receptor | D0N37_RS07485 | Not Available | Positive | 1582590 - 1584833 | 80951.5 |
| tonb-dependent receptor | D0N37_RS07490 | Not Available | Negative | 1585129 - 1587381 | 81462.5 |
| laci family dna-binding transcriptional regulator | D0N37_RS07495 | Not Available | Positive | 1587635 - 1588636 | 35931.2 |
| integrase core domain-containing protein | D0N37_RS07500 | Not Available | Positive | 1588851 - 1590108 | 44020.6 |
| trehalase family glycosidase | D0N37_RS07505 | Not Available | Positive | 1590117 - 1591634 | 57046.6 |
| helix-turn-helix transcriptional regulator | D0N37_RS07510 | Not Available | Negative | 1591570 - 1592481 | 34978.0 |
| integrase core domain-containing protein | D0N37_RS07515 | Not Available | Positive | 1592640 - 1594159 | 54935.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
