Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-dependent transporter | D0N37_RS07420 | Not Available | Negative | 1569550 - 1570896 | 48194.8 |
| sensor histidine kinase | D0N37_RS07425 | Not Available | Negative | 1571118 - 1572404 | 48557.4 |
| response regulator | D0N37_RS07430 | Not Available | Negative | 1572425 - 1573132 | 26338.6 |
| hypothetical protein | D0N37_RS07435 | Not Available | Negative | 1573252 - 1574055 | 29277.4 |
| serine hydrolase domain-containing protein | D0N37_RS07440 | Not Available | Positive | 1574154 - 1575401 | 47035.4 |
| integrase core domain-containing protein | D0N37_RS07445 | Not Available | Negative | 1575418 - 1575693 | 10399.7 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | D0N37_RS07450 | Not Available | Positive | 1575780 - 1576409 | 23488.3 |
| atp-dependent zinc metalloprotease ftsh | D0N37_RS07455 | Not Available | Positive | 1576477 - 1578429 | 71696.2 |
| dihydropteroate synthase | D0N37_RS07460 | Not Available | Positive | 1578578 - 1579423 | 30598.7 |
| integrase core domain-containing protein | D0N37_RS07465 | Not Available | Positive | 1579420 - 1580759 | 47921.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
