Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-acp synthase i | D0N37_RS07320 | Not Available | Positive | 1547554 - 1548768 | 42718.6 |
| ssra-binding protein smpb | D0N37_RS07325 | Not Available | Negative | 1548850 - 1549332 | 18646.5 |
| type ii toxin-antitoxin system rata family toxin | D0N37_RS07330 | Not Available | Positive | 1549474 - 1549908 | 16206.5 |
| rnfh family protein | D0N37_RS07335 | Not Available | Positive | 1549908 - 1550243 | 12096.4 |
| outer membrane protein assembly factor bame | D0N37_RS07340 | Not Available | Negative | 1550298 - 1550657 | 13931.5 |
| giy-yig nuclease family protein | D0N37_RS07345 | Not Available | Positive | 1550839 - 1551171 | 12502.3 |
| m20/m25/m40 family metallo-hydrolase | D0N37_RS07350 | Not Available | Negative | 1551099 - 1552034 | 34895.4 |
| tetratricopeptide repeat protein | D0N37_RS07355 | Not Available | Negative | 1552043 - 1553242 | 45210.5 |
| methyl-accepting chemotaxis protein | D0N37_RS07360 | Not Available | Negative | 1553436 - 1555337 | 68674.2 |
| ketol-acid reductoisomerase | D0N37_RS07365 | Not Available | Negative | 1555600 - 1557072 | 54393.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
