Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkene reductase | D0N37_RS07270 | Not Available | Positive | 1529003 - 1530043 | 37920.9 |
| ggdef domain-containing protein | D0N37_RS07275 | Not Available | Positive | 1530349 - 1531374 | 39299.3 |
| hypothetical protein | D0N37_RS07280 | Not Available | Positive | 1531518 - 1531937 | 14936.5 |
| exodeoxyribonuclease v subunit gamma | D0N37_RS07285 | Not Available | Positive | 1532042 - 1535299 | 123517.0 |
| exodeoxyribonuclease v subunit beta | D0N37_RS07290 | Not Available | Positive | 1535286 - 1538822 | 133079.0 |
| exodeoxyribonuclease v subunit alpha | D0N37_RS07295 | Not Available | Positive | 1538819 - 1540696 | 69439.4 |
| cation:dicarboxylate symporter family transporter | D0N37_RS07300 | Not Available | Negative | 1540823 - 1543009 | 81085.4 |
| malate synthase | D0N37_RS07305 | Not Available | Negative | 1543104 - 1543592 | 18364.9 |
| duf3612 domain-containing protein | D0N37_RS07310 | Not Available | Positive | 1543739 - 1545235 | 55448.5 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | D0N37_RS07315 | Not Available | Negative | 1545392 - 1547377 | 73184.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
