Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 1516511 - 1516586 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 1516741 - 1516816 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 1516971 - 1517046 | Not Available |
| quinolinate synthase nada | D0N37_RS07190 | Not Available | Positive | 1517180 - 1518223 | 38340.2 |
| Trna-ser | Not Available | Not Available | Positive | 1518313 - 1518403 | Not Available |
| duf6538 domain-containing protein | D0N37_RS07200 | Not Available | Positive | 1518530 - 1518754 | 8770.67 |
| site-specific integrase | D0N37_RS07205 | Not Available | Positive | 1518726 - 1519271 | 21221.4 |
| tyrosine-type recombinase/integrase | D0N37_RS07210 | Not Available | Positive | 1519332 - 1519895 | 20732.0 |
| frg domain-containing protein | D0N37_RS07215 | Not Available | Positive | 1520122 - 1521045 | 35450.1 |
| hypothetical protein | D0N37_RS07220 | Not Available | Negative | 1521669 - 1522598 | 34910.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
