Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ysc84-related protein | D0N37_RS07070 | Not Available | Positive | 1501128 - 1501691 | 19869.8 |
| bcr/cfla family multidrug efflux mfs transporter | D0N37_RS07075 | Not Available | Negative | 1501747 - 1502952 | 43488.7 |
| m48 family metallopeptidase | D0N37_RS07080 | Not Available | Positive | 1503183 - 1503980 | 28487.0 |
| m48 family metallopeptidase | D0N37_RS07085 | Not Available | Negative | 1504009 - 1504515 | 19997.0 |
| duf72 domain-containing protein | D0N37_RS07090 | Not Available | Negative | 1504515 - 1505363 | 32859.3 |
| aspartate--trna ligase | D0N37_RS07095 | Not Available | Positive | 1505558 - 1507342 | 66547.6 |
| crossover junction endodeoxyribonuclease ruvc | D0N37_RS07100 | Not Available | Positive | 1507466 - 1507987 | 18373.4 |
| integrase core domain-containing protein | D0N37_RS07105 | Not Available | Positive | 1507990 - 1508606 | 22237.5 |
| holliday junction branch migration dna helicase ruvb | D0N37_RS07110 | Not Available | Positive | 1508609 - 1509613 | 37106.6 |
| protein tolq | D0N37_RS07120 | Not Available | Positive | 1510815 - 1511519 | 25645.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
