Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0N37_RS06745 | Not Available | Positive | 1428334 - 1430013 | 61245.1 |
| is3 family transposase | D0N37_RS06750 | Not Available | Positive | 1430439 - 1431619 | 45298.0 |
| hypothetical protein | D0N37_RS06755 | Not Available | Positive | 1431616 - 1431969 | 12640.8 |
| hypothetical protein | D0N37_RS06760 | Not Available | Positive | 1432228 - 1432914 | 25608.0 |
| helix-turn-helix domain-containing protein | D0N37_RS06765 | Not Available | Negative | 1433069 - 1433602 | 19887.8 |
| serine hydrolase domain-containing protein | D0N37_RS06770 | Not Available | Positive | 1433685 - 1435064 | 51395.3 |
| dsba family protein | D0N37_RS06775 | Not Available | Negative | 1435303 - 1435926 | 23192.1 |
| mbl fold metallo-hydrolase | D0N37_RS06780 | Not Available | Negative | 1435920 - 1436786 | 31255.8 |
| lysr family transcriptional regulator | D0N37_RS06785 | Not Available | Positive | 1436892 - 1437779 | 32709.4 |
| sigma-54-dependent fis family transcriptional regulator | D0N37_RS06790 | Not Available | Positive | 1438150 - 1440135 | 72131.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
