Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sh3 domain-containing protein | D0N37_RS06695 | Not Available | Negative | 1417133 - 1418155 | 37777.3 |
| gamma-mobile-trio recombinase gmty | D0N37_RS06700 | Not Available | Positive | 1418319 - 1419788 | 55924.0 |
| integrase family protein | D0N37_RS06705 | Not Available | Positive | 1419785 - 1422373 | 99713.0 |
| gamma-mobile-trio protein gmtx | D0N37_RS06710 | Not Available | Positive | 1422366 - 1423007 | 23584.3 |
| abortive infection family protein | D0N37_RS06715 | Not Available | Negative | 1423084 - 1423824 | 27568.9 |
| hypothetical protein | D0N37_RS06720 | Not Available | Negative | 1423961 - 1424926 | 37658.4 |
| recombinase family protein | D0N37_RS06725 | Not Available | Negative | 1424982 - 1425539 | 20407.5 |
| hypothetical protein | D0N37_RS06730 | Not Available | Positive | 1425657 - 1426412 | 29157.1 |
| duf4365 domain-containing protein | D0N37_RS06735 | Not Available | Positive | 1426656 - 1427552 | 35630.5 |
| tn7 transposase tnsa n-terminal domain-containing protein | D0N37_RS06740 | Not Available | Positive | 1427888 - 1428232 | 13525.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
