Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0N37_RS06645 | Not Available | Positive | 1404594 - 1404941 | 12704.0 |
| ggdef domain-containing protein | D0N37_RS06650 | Not Available | Negative | 1404975 - 1405871 | 33862.2 |
| monovalent cation:proton antiporter-2 (cpa2) family protein | D0N37_RS06655 | Not Available | Positive | 1406025 - 1407995 | 72750.7 |
| winged helix-turn-helix domain-containing protein | D0N37_RS06660 | Not Available | Negative | 1408686 - 1410659 | 74217.4 |
| alpha/beta hydrolase-fold protein | D0N37_RS06665 | Not Available | Positive | 1410891 - 1412102 | 46120.0 |
| gnat family n-acetyltransferase | D0N37_RS06670 | Not Available | Negative | 1412346 - 1412927 | 22170.2 |
| beta-propeller fold lactonase family protein | D0N37_RS06675 | Not Available | Negative | 1412931 - 1414112 | 42521.3 |
| integrase core domain-containing protein | D0N37_RS06680 | Not Available | Negative | 1414143 - 1415281 | 41639.2 |
| duf3014 domain-containing protein | D0N37_RS06685 | Not Available | Positive | 1415821 - 1416699 | 32837.9 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 1416846 - 1416942 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
