Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | D0N37_RS06595 | Not Available | Positive | 1391650 - 1394121 | 92648.4 |
| omph family outer membrane protein | D0N37_RS06600 | Not Available | Positive | 1394133 - 1394651 | 19525.8 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | D0N37_RS06605 | Not Available | Positive | 1394651 - 1395694 | 36627.7 |
| 3-hydroxyacyl-acp dehydratase fabz | D0N37_RS06610 | Not Available | Positive | 1395705 - 1396157 | 17204.0 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | D0N37_RS06615 | Not Available | Positive | 1396157 - 1396930 | 27783.1 |
| lipid-a-disaccharide synthase | D0N37_RS06620 | Not Available | Positive | 1397003 - 1398157 | 42199.6 |
| ribonuclease hii | D0N37_RS06625 | Not Available | Positive | 1398147 - 1398740 | 21318.8 |
| dna polymerase iii subunit alpha | D0N37_RS06630 | Not Available | Positive | 1398743 - 1402234 | 130480.0 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | D0N37_RS06635 | Not Available | Positive | 1402251 - 1403207 | 35303.7 |
| trna lysidine(34) synthetase tils | D0N37_RS06640 | Not Available | Positive | 1403294 - 1404601 | 49137.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
