Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [protein-pii] uridylyltransferase | D0N37_RS06545 | Not Available | Negative | 1379886 - 1382504 | 101195.0 |
| type i methionyl aminopeptidase | D0N37_RS06550 | Not Available | Negative | 1382721 - 1383512 | 29163.2 |
| 30s ribosomal protein s2 | D0N37_RS06555 | Not Available | Positive | 1383792 - 1384520 | 26939.4 |
| translation elongation factor ts | D0N37_RS06560 | Not Available | Positive | 1384741 - 1385592 | 30333.4 |
| ump kinase | D0N37_RS06565 | Not Available | Positive | 1385732 - 1386469 | 26437.2 |
| ribosome recycling factor | D0N37_RS06570 | Not Available | Positive | 1386562 - 1387119 | 20392.5 |
| isoprenyl transferase | D0N37_RS06575 | Not Available | Positive | 1387291 - 1388064 | 29014.5 |
| phosphatidate cytidylyltransferase | D0N37_RS06580 | Not Available | Positive | 1388075 - 1388941 | 31614.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | D0N37_RS06585 | Not Available | Positive | 1388938 - 1390128 | 42866.7 |
| sigma e protease regulator rsep | D0N37_RS06590 | Not Available | Positive | 1390131 - 1391483 | 49023.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
