Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mucb/rseb c-terminal domain-containing protein | D0N37_RS06495 | Not Available | Positive | 1369580 - 1370530 | 35289.1 |
| soxr reducing system rsec family protein | D0N37_RS06500 | Not Available | Positive | 1370527 - 1370985 | 16563.6 |
| translation elongation factor 4 | D0N37_RS06505 | Not Available | Positive | 1371045 - 1372832 | 66172.0 |
| signal peptidase i | D0N37_RS06510 | Not Available | Positive | 1372845 - 1373780 | 35170.2 |
| ribonuclease iii | D0N37_RS06515 | Not Available | Positive | 1373783 - 1374460 | 25170.1 |
| gtpase era | D0N37_RS06520 | Not Available | Positive | 1374450 - 1375349 | 34264.6 |
| dna repair protein reco | D0N37_RS06525 | Not Available | Positive | 1375350 - 1376042 | 26336.1 |
| pyridoxine 5'-phosphate synthase | D0N37_RS06530 | Not Available | Positive | 1376128 - 1376862 | 26791.1 |
| tonb-dependent receptor | D0N37_RS06535 | Not Available | Positive | 1376944 - 1378998 | 76849.1 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | D0N37_RS06540 | Not Available | Negative | 1379048 - 1379875 | 29787.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
