Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf440 family protein | D0N37_RS06445 | Not Available | Positive | 1362566 - 1362883 | 12289.1 |
| ydiy family protein | D0N37_RS06450 | Not Available | Positive | 1362901 - 1363728 | 31797.9 |
| hypothetical protein | D0N37_RS06455 | Not Available | Positive | 1363740 - 1364189 | 16822.5 |
| peptidylprolyl isomerase | D0N37_RS06460 | Not Available | Negative | 1364215 - 1364700 | 17485.2 |
| pp_01224 | D0N37_RS06465 | Not Available | Negative | 1364712 - 1365623 | Not Available |
| succinate dehydrogenase assembly factor 2 | D0N37_RS06470 | Not Available | Positive | 1365784 - 1366035 | 9813.08 |
| protein ygfx | D0N37_RS06475 | Not Available | Positive | 1366016 - 1366429 | 15640.4 |
| l-aspartate oxidase | D0N37_RS06480 | Not Available | Negative | 1366487 - 1368088 | 59329.6 |
| rna polymerase sigma factor rpoe | D0N37_RS06485 | Not Available | Positive | 1368385 - 1368966 | 21668.7 |
| sigma-e factor negative regulatory protein | D0N37_RS06490 | Not Available | Positive | 1368968 - 1369579 | 22189.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
