Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein pspa | D0N37_RS06350 | Not Available | Positive | 1345361 - 1346041 | 25908.6 |
| envelope stress response membrane protein pspb | D0N37_RS06355 | Not Available | Positive | 1346119 - 1346352 | 9027.17 |
| envelope stress response membrane protein pspc | D0N37_RS06360 | Not Available | Positive | 1346349 - 1346750 | 15533.0 |
| ycjx family protein | D0N37_RS06365 | Not Available | Positive | 1346801 - 1348213 | 53429.3 |
| tigr01620 family protein | D0N37_RS06370 | Not Available | Positive | 1348210 - 1349235 | 38136.8 |
| trans-sulfuration enzyme family protein | D0N37_RS06375 | Not Available | Positive | 1349420 - 1350598 | 42645.9 |
| phenylalanine 4-monooxygenase | D0N37_RS06380 | Not Available | Positive | 1350853 - 1351650 | 30399.3 |
| 4a-hydroxytetrahydrobiopterin dehydratase | D0N37_RS06385 | Not Available | Positive | 1351661 - 1352002 | 12805.2 |
| yip1 family protein | D0N37_RS06390 | Not Available | Negative | 1352245 - 1352844 | 22033.0 |
| trna isopentenyl-2-thiomethyl-a-37 hydroxylase miae | D0N37_RS06395 | Not Available | Positive | 1353054 - 1353836 | 29876.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
