Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix domain-containing protein | D0N37_RS06195 | Not Available | Positive | 1316090 - 1317847 | 66903.5 |
| fatty acid metabolism transcriptional regulator fadr | D0N37_RS06205 | Not Available | Positive | 1318410 - 1319123 | 27075.1 |
| peroxiredoxin | D0N37_RS06210 | Not Available | Positive | 1319443 - 1320048 | 22126.2 |
| hypothetical protein | D0N37_RS06215 | Not Available | Negative | 1320305 - 1320547 | 8896.58 |
| endonuclease smrb | D0N37_RS06220 | Not Available | Negative | 1320784 - 1321335 | 20732.0 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | D0N37_RS06225 | Not Available | Positive | 1321432 - 1322367 | 35025.7 |
| chorismate synthase | D0N37_RS06230 | Not Available | Positive | 1322415 - 1323512 | 39552.9 |
| hypothetical protein | D0N37_RS06235 | Not Available | Positive | 1323579 - 1324010 | 16165.0 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | D0N37_RS06240 | Not Available | Negative | 1324073 - 1324927 | 30464.8 |
| hypothetical protein | D0N37_RS06245 | Not Available | Positive | 1324963 - 1325370 | 15182.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
