Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | D0N37_RS06095 | Not Available | Negative | 1290819 - 1292036 | 43554.0 |
| sugar phosphate isomerase/epimerase family protein | D0N37_RS06100 | Not Available | Negative | 1292051 - 1293106 | 39690.7 |
| gfo/idh/moca family protein | D0N37_RS06105 | Not Available | Negative | 1293114 - 1294274 | 41615.4 |
| arac family transcriptional regulator | D0N37_RS06110 | Not Available | Positive | 1294432 - 1295166 | 28252.9 |
| badf/badg/bcra/bcrd atpase family protein | D0N37_RS06115 | Not Available | Negative | 1295146 - 1296006 | 30284.3 |
| copper homeostasis protein cutc | D0N37_RS06120 | Not Available | Negative | 1296003 - 1296749 | 26161.4 |
| tonb-dependent receptor | D0N37_RS06125 | Not Available | Positive | 1297134 - 1300118 | 109440.0 |
| discoidin domain-containing protein | D0N37_RS06130 | Not Available | Positive | 1300263 - 1303103 | 101956.0 |
| prephenate dehydratase | D0N37_RS06135 | Not Available | Negative | 1303211 - 1304365 | 42517.8 |
| integrase core domain-containing protein | D0N37_RS06140 | Not Available | Positive | 1304735 - 1307697 | 110672.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
