Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system phd/yefm family antitoxin | D0N37_RS06045 | Not Available | Positive | 1281983 - 1282237 | 9486.18 |
| txe/yoeb family addiction module toxin | D0N37_RS06050 | Not Available | Positive | 1282230 - 1282499 | 10501.4 |
| gnat family n-acetyltransferase | D0N37_RS06055 | Not Available | Positive | 1282904 - 1283407 | 19492.1 |
| transposase | D0N37_RS06060 | Not Available | Positive | 1283616 - 1285154 | 58400.0 |
| gyri-like domain-containing protein | D0N37_RS06065 | Not Available | Positive | 1285356 - 1285994 | 24785.8 |
| hypothetical protein | D0N37_RS06070 | Not Available | Positive | 1286115 - 1286699 | 22625.1 |
| sugar phosphate isomerase/epimerase family protein | D0N37_RS06075 | Not Available | Negative | 1286728 - 1287585 | 32457.7 |
| gluconate 2-dehydrogenase subunit 3 family protein | D0N37_RS06080 | Not Available | Negative | 1287654 - 1288403 | 27274.4 |
| gmc family oxidoreductase | D0N37_RS06085 | Not Available | Negative | 1288403 - 1290082 | 61192.7 |
| duf1080 domain-containing protein | D0N37_RS06090 | Not Available | Negative | 1290085 - 1290780 | 25624.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
