Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation factor rimm | D0N37_RS05995 | Not Available | Positive | 1271342 - 1271875 | 19987.5 |
| trna (guanosine(37)-n1)-methyltransferase trmd | D0N37_RS06000 | Not Available | Positive | 1271875 - 1272642 | 28177.5 |
| 50s ribosomal protein l19 | D0N37_RS06005 | Not Available | Positive | 1272676 - 1273035 | 13345.2 |
| bifunctional chorismate mutase/prephenate dehydrogenase | D0N37_RS06010 | Not Available | Positive | 1273247 - 1274395 | 42618.7 |
| phosphotransferase | D0N37_RS06015 | Not Available | Positive | 1274840 - 1275805 | 37163.6 |
| integrase core domain-containing protein | D0N37_RS06020 | Not Available | Positive | 1275970 - 1276380 | 15242.9 |
| integrase core domain-containing protein | D0N37_RS06025 | Not Available | Positive | 1276623 - 1277432 | 29635.2 |
| tetratricopeptide repeat protein | D0N37_RS06030 | Not Available | Positive | 1277582 - 1279285 | 64006.3 |
| gyri-like domain-containing protein | D0N37_RS06035 | Not Available | Positive | 1279506 - 1280369 | 32916.2 |
| integrase core domain-containing protein | D0N37_RS06040 | Not Available | Negative | 1280639 - 1281735 | 41444.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
