Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan editing factor pgef | D0N37_RS05945 | Not Available | Positive | 1259105 - 1259821 | 26396.5 |
| atp-dependent chaperone clpb | D0N37_RS05950 | Not Available | Positive | 1259912 - 1262485 | 95680.7 |
| nadp-dependent oxidoreductase | D0N37_RS05955 | Not Available | Positive | 1262614 - 1263549 | 33646.7 |
| glutamate--cysteine ligase | D0N37_RS05960 | Not Available | Positive | 1263678 - 1265255 | 59362.8 |
| transglycosylase slt domain-containing protein | D0N37_RS05965 | Not Available | Positive | 1265386 - 1265994 | 23786.1 |
| hlyc/corc family transporter | D0N37_RS05970 | Not Available | Negative | 1266047 - 1267306 | 46683.9 |
| inner membrane protein ypjd | D0N37_RS05975 | Not Available | Negative | 1267375 - 1268181 | 29764.8 |
| signal recognition particle protein | D0N37_RS05980 | Not Available | Positive | 1268389 - 1269768 | 50211.9 |
| tannase/feruloyl esterase family alpha/beta hydrolase | D0N37_RS24635 | Not Available | Negative | 1270085 - 1270465 | 13779.2 |
| 30s ribosomal protein s16 | D0N37_RS05990 | Not Available | Positive | 1271076 - 1271324 | 9200.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
