Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | D0N37_RS05895 | Not Available | Positive | 1249520 - 1250076 | 20042.3 |
| pilw family protein | D0N37_RS24625 | Not Available | Positive | 1250073 - 1250666 | 21408.0 |
| pilw family protein | D0N37_RS24630 | Not Available | Positive | 1250612 - 1251526 | 34372.3 |
| pilus assembly protein | D0N37_RS05910 | Not Available | Positive | 1251549 - 1254683 | 115684.0 |
| type iv pilin protein | D0N37_RS05915 | Not Available | Positive | 1254670 - 1255107 | 15877.0 |
| gsph/fimt family protein | D0N37_RS05920 | Not Available | Negative | 1255399 - 1255905 | 18725.5 |
| gsph/fimt family pseudopilin | D0N37_RS05925 | Not Available | Negative | 1256005 - 1256610 | 21921.9 |
| nitrogen regulatory protein p-ii | D0N37_RS05930 | Not Available | Positive | 1256679 - 1257017 | 12513.2 |
| outer membrane protein assembly factor bamd | D0N37_RS05935 | Not Available | Negative | 1257238 - 1258002 | 29121.6 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | D0N37_RS05940 | Not Available | Positive | 1258126 - 1259103 | 36618.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
