Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | D0N37_RS05845 | Not Available | Positive | 1239249 - 1239632 | 14090.0 |
| 30s ribosomal protein s20 | D0N37_RS05850 | Not Available | Negative | 1239726 - 1239986 | 9604.95 |
| integrase core domain-containing protein | D0N37_RS05855 | Not Available | Positive | 1240462 - 1241975 | 55278.5 |
| bifunctional riboflavin kinase/fad synthetase | D0N37_RS05860 | Not Available | Positive | 1242043 - 1242969 | 34665.2 |
| isoleucine--trna ligase | D0N37_RS05865 | Not Available | Positive | 1242991 - 1245819 | 105440.0 |
| signal peptidase ii | D0N37_RS05870 | Not Available | Positive | 1245829 - 1246332 | 18841.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | D0N37_RS05875 | Not Available | Positive | 1246329 - 1246769 | 15821.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | D0N37_RS05880 | Not Available | Positive | 1246769 - 1247698 | 33902.2 |
| sensor histidine kinase | D0N37_RS05885 | Not Available | Positive | 1247712 - 1248716 | 37215.5 |
| lytr/algr family response regulator transcription factor | D0N37_RS05890 | Not Available | Positive | 1248713 - 1249402 | 26168.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
