Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(65) synthase truc | D0N37_RS05740 | Not Available | Positive | 1224070 - 1224804 | 28108.8 |
| flavodoxin | D0N37_RS05745 | Not Available | Positive | 1224804 - 1225247 | 15891.8 |
| hypothetical protein | D0N37_RS05750 | Not Available | Positive | 1225452 - 1225652 | 7434.89 |
| lysm peptidoglycan-binding domain-containing protein | D0N37_RS05755 | Not Available | Negative | 1225881 - 1227455 | 59871.6 |
| hydroxyacylglutathione hydrolase | D0N37_RS05760 | Not Available | Negative | 1227683 - 1228450 | 28707.9 |
| class i sam-dependent methyltransferase | D0N37_RS05765 | Not Available | Positive | 1228503 - 1229252 | 28555.9 |
| ribonuclease hi | D0N37_RS05770 | Not Available | Negative | 1229314 - 1229784 | 17629.8 |
| dna polymerase iii subunit epsilon | D0N37_RS05775 | Not Available | Positive | 1229854 - 1230564 | 26632.6 |
| tigr03503 family protein | D0N37_RS05780 | Not Available | Positive | 1230665 - 1232035 | 51256.5 |
| Trna-asp | Not Available | Not Available | Positive | 1232146 - 1232222 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
