Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | D0N37_RS05690 | Not Available | Negative | 1217142 - 1217987 | 32109.6 |
| secy-interacting protein | D0N37_RS05695 | Not Available | Positive | 1218113 - 1218664 | 20776.6 |
| zn-ribbon-containing protein | D0N37_RS05700 | Not Available | Negative | 1218683 - 1219456 | 29337.8 |
| hypothetical protein | D0N37_RS05705 | Not Available | Negative | 1219456 - 1219716 | 9390.41 |
| duf2789 domain-containing protein | D0N37_RS05710 | Not Available | Negative | 1219788 - 1220015 | 8731.21 |
| gnat family n-acetyltransferase | D0N37_RS05715 | Not Available | Positive | 1220292 - 1220924 | 23788.7 |
| duf805 domain-containing protein | D0N37_RS05720 | Not Available | Positive | 1221837 - 1222184 | 13145.2 |
| duf3301 domain-containing protein | D0N37_RS05725 | Not Available | Negative | 1222260 - 1222565 | 11498.9 |
| duf3549 family protein | D0N37_RS05730 | Not Available | Negative | 1222566 - 1223594 | 37985.3 |
| yqcc family protein | D0N37_RS05735 | Not Available | Positive | 1223753 - 1224070 | 11775.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
