Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | D0N37_RS05630 | Not Available | Positive | 1200862 - 1203140 | 84192.2 |
| eal domain-containing protein | D0N37_RS05645 | Not Available | Negative | 1203504 - 1205864 | 88677.5 |
| dihydroorotase | D0N37_RS05650 | Not Available | Positive | 1206050 - 1207087 | 37884.1 |
| h-ns family nucleoid-associated regulatory protein | D0N37_RS05655 | Not Available | Positive | 1207255 - 1207560 | 11497.8 |
| dead/deah box helicase | D0N37_RS05660 | Not Available | Positive | 1207674 - 1209416 | 65259.9 |
| ribonuclease e inhibitor rrab | D0N37_RS05665 | Not Available | Negative | 1209432 - 1209764 | 12265.3 |
| autotransporter assembly complex protein tama | D0N37_RS05670 | Not Available | Positive | 1210004 - 1211740 | 65209.1 |
| translocation/assembly module tamb domain-containing protein | D0N37_RS05675 | Not Available | Positive | 1211740 - 1215399 | 132895.0 |
| transporter substrate-binding domain-containing protein | D0N37_RS05680 | Not Available | Positive | 1215396 - 1216217 | 31012.4 |
| peptidylprolyl isomerase | D0N37_RS05685 | Not Available | Positive | 1216220 - 1217089 | 31566.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
